# chrom start end strand circRNA ID genomic length spliced seq length total reads (circular junction) unique reads (circular junction) unique reads (linear-5' junctions) unique reads (linear-3' junctions) samples repeats annotation best transcript gene symbol circRNA study chr17 84785850 84797667 - mmu_circ_0000825 11817 11817 3 3 55 66 mm_ES, mm_head, mm_brain2, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr17 63820756 63840236 - mmu_circ_0000802 19480 513 4 4 7 9 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_015794 Fbxl17 Memczak2013, Rybak2015 chr2 129636223 129636973 + mmu_circ_0001066 750 750 6 6 10 16 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 NM_183262 Stk35 Memczak2013, Rybak2015 chr2 168725284 168752433 - mmu_circ_0009622 27149 801 2 2 0 8 PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, PN_D07 NA ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start ENSMUST00000029064 Zfp64 Rybak2015 chr19 4784723 4788042 - mmu_circ_0000918 3319 1526 2 2 0 0 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D01 None ALT_DONOR, CDS, coding, INTERNAL, UTR3 NM_009032 Rbm4 Memczak2013, Rybak2015 chr17 21719996 21720109 + mmu_circ_0006565 113 113 2 2 5 6 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000088787 Zfp948 Rybak2015 chr8 81895682 81896263 - mmu_circ_0001699 581 581 3 3 4 9 mm_head, mm_brain1, PN_D21, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_008539 Smad1 Memczak2013, Rybak2015 chr17 63820756 63837318 - mmu_circ_0006902 16562 390 2 2 7 11 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000024761 Fbxl17 Rybak2015 chr16 94605518 94624975 + mmu_circ_0000714 19457 19457 3 2 12 6 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None INTERGENIC None None Memczak2013, Rybak2015 chr2 74406997 74411683 - mmu_circ_0001038 4686 319 2 2 10 14 mm_head, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, cerebellum, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_027133 Lnp Memczak2013, Rybak2015 chr18 77335987 77336462 + mmu_circ_0007529 475 475 3 3 33 18 P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000168882 Pias2 Rybak2015 chr7 63352746 63353856 + mmu_circ_0001570 1110 341 2 2 13 8 mm_head, mm_brain1, frontal_cortex, P19_exp1_D0, midbrain, PN_D07, hindbrain, cerebellum, PN_D14 None ANNOTATED, CDS, coding, INTERNAL NM_010418 Herc2 Memczak2013, Rybak2015 chr13 69651767 69654781 - mmu_circ_0000477 3014 292 2 2 18 7 mm_ES, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_198600 Papd7 Memczak2013, Rybak2015 chr12 4769132 4770953 - mmu_circ_0004000 1821 342 2 2 0 0 P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000053458 A830093I24Rik Rybak2015 chr10 39978311 39978476 - mmu_circ_0002193 165 165 3 2 0 0 P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 NA ANTISENSE, INTERNAL, ncRNA, OVEXON ENSMUST00000083936 U3 Rybak2015 chr5 31508520 31508661 + mmu_circ_0012532 141 141 7 5 0 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0, sy_cyto NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000031032 Ppm1g Rybak2015 chr4 108151477 108152346 + mmu_circ_0001239 869 869 3 3 11 5 mm_head, P19_exp2_D12, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_175472 Zcchc11 Memczak2013, Rybak2015 chr4 149805631 149813577 + mmu_circ_0001297 7946 197 2 2 9 11 mm_ES, mm_brain1, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_001085492 Rere Memczak2013, Rybak2015 chr8 93506635 93507447 + mmu_circ_0015103 812 812 2 2 21 0 P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON ENSMUST00000109614 Chd9 Rybak2015 chr7 140139726 140142118 + mmu_circ_0001636 2392 2392 2 2 19 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start NM_207302 Zranb1 Memczak2013, Rybak2015 chr15 12269382 12272906 + mmu_circ_0005533 3524 247 4 4 37 32 PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, hippocampus, cerebellum, PN_D01, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000165551 Golph3 Rybak2015 chr11 19898122 19908480 + mmu_circ_0000239 10358 412 4 4 14 15 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_033523 Spred2 Memczak2013, Rybak2015 chr13 58279211 58284685 - mmu_circ_0004691 5474 687 4 4 0 28 P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000058735 Ubqln1 Rybak2015 chr12 102280034 102280166 - mmu_circ_0003653 132 132 2 2 15 0 P19_exp1_D0, hindbrain NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000163095 Smek1 Rybak2015 chr12 52724162 52762700 - mmu_circ_0004027 38538 1603 2 2 27 19 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000013130 Strn3 Rybak2015 chr19 57826119 57871993 + mmu_circ_0000968 45874 473 2 2 0 9 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_181415 Atrnl1 Memczak2013, Rybak2015 chrX 47923314 47965418 - mmu_circ_0016296 42104 42104 3 3 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, intronic, ncRNA ENSMUST00000124842 6720401G13Rik Rybak2015 chr2 103919014 103938001 + mmu_circ_0009130 18987 13604 2 2 0 0 P19_exp1_D2, P19_exp1_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, UTR3, UTR5 ENSMUST00000090429 Cd59b Rybak2015 chr5 23122144 23135295 - mmu_circ_0012447 13151 13151 2 2 6 0 P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start, UTR5 ENSMUST00000088392 Srpk2 Rybak2015 chr4 134482426 134482552 + mmu_circ_0011299 126 126 2 2 0 0 P19_exp2_D12, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000148900 D4Wsu53e Rybak2015 chr4 32778688 32782540 + mmu_circ_0011560 3852 651 2 2 30 37 PN_D28, P19_exp1_D12, P19_exp1_D0, midbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000071642 Mdn1 Rybak2015 chr9 120859290 120868647 + mmu_circ_0001859 9357 2406 2 2 0 38 mm_head, mm_brain1, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hindbrain None ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3, UTR5 NM_007614 Ctnnb1 Memczak2013, Rybak2015 chr11 100983986 101018234 + mmu_circ_0002636 34248 31717 25 15 0 7 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, UTR3 ENSMUST00000043680 Tubg1 Rybak2015 chr8 108602503 108603641 + mmu_circ_0014521 1138 1138 2 2 17 13 PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000109308 Nfatc3 Rybak2015 chr13 17842090 17864791 - mmu_circ_0000433 22701 1386 4 4 16 15 mm_head, mm_brain1, P19_exp2_D12, P19_exp2_D4, P19_exp1_D0, forebrain, hippocampus, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001081058 Cdk13 Memczak2013, Rybak2015 chr6 119319877 119320426 - mmu_circ_0013007 549 549 2 2 2 52 P19_exp1_D0 NA ALT_DONOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON, UTR5 ENSMUST00000032272 Adipor2 Rybak2015 chr1 5079089 5088214 + mmu_circ_0008751 9125 412 4 4 12 22 P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, hippocampus, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000044369 Atp6v1h Rybak2015 chr7 67124916 67125019 - mmu_circ_0014304 103 103 2 2 0 0 P19_exp1_D0 NA INTERGENIC None None Rybak2015 chr8 113568777 113568902 + mmu_circ_0014570 125 125 2 2 130 67 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000034441 Aars Rybak2015 chr11 100987345 101022502 + mmu_circ_0000322 35157 35157 16 11 0 0 mm_head, P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, midbrain, P19_exp2_D0 None ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, UTR3 NM_134024 Tubg1 Memczak2013, Rybak2015 chr3 138678509 138684899 - mmu_circ_0010495 6390 249 2 2 23 22 P19_exp1_D12, P19_exp1_D0, midbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000098574 Rap1gds1 Rybak2015 chr4 148755291 148761325 - mmu_circ_0011432 6034 598 2 2 53 38 P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000103212 Ube4b Rybak2015 chr11 8378227 8379668 - mmu_circ_0000233 1441 360 3 2 27 22 mm_ES, mm_head, P19_exp1_D0, forebrain, hindbrain, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001083587 Tns3 Memczak2013, Rybak2015 chr2 104310905 104312004 - mmu_circ_0001052 1099 1099 3 3 2 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_010434 Hipk3 Memczak2013, Rybak2015 chr7 66496336 66502587 + mmu_circ_0001572 6251 232 2 2 12 0 mm_ES, mm_head, mm_brain2, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, cerebellum None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_011668 Ube3a Memczak2013, Rybak2015 chr18 83156135 83157590 + mmu_circ_0007569 1455 1455 2 2 10 10 P19_exp2_D12, P19_exp1_D4, P19_exp1_D0, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000171238 Zfp516 Rybak2015 chr5 33162514 33178337 - mmu_circ_0001333 15823 5072 2 2 0 7 mm_ES, mm_head, P19_exp2_D12, sy_cell, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_194340 C330019G07Rik Memczak2013, Rybak2015 chr4 74037280 74050828 + mmu_circ_0011772 13548 317 2 2 0 22 P19_exp1_D0 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000030102 Kdm4c Rybak2015 chr14 45954327 45963402 + mmu_circ_0005239 9075 721 2 2 43 28 PN_D21, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000022380 Psmc6 Rybak2015 chr13 56824789 56837417 + mmu_circ_0004682 12628 1419 2 2 17 7 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000069557 Smad5 Rybak2015 chr11 108784465 108792893 + mmu_circ_0000335 8428 1092 2 2 7 8 mm_head, mm_brain1, P19_exp2_D12, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_015732 Axin2 Memczak2013, Rybak2015 chr19 4342846 4394892 - mmu_circ_0007804 52046 1538 4 3 23 18 olfactory_bulb, P19_exp2_D4, P19_exp1_D0, forebrain, midbrain, cerebellum, PN_D14, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000075856 Kdm2a Rybak2015 chr6 108763620 108768607 + mmu_circ_0012927 4987 388 2 2 32 56 PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, cerebellum NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000032196 Arl8b Rybak2015 chr7 105031981 105037530 + mmu_circ_0013680 5549 356 3 3 9 7 P19_exp2_D12, P19_exp1_D0, forebrain, midbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000033040 Pak1 Rybak2015 chr9 20449849 20450103 + mmu_circ_0015432 254 142 3 3 8 29 P19_exp1_D0, forebrain, midbrain, hindbrain, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000161486 Ubl5 Rybak2015 chr17 80443833 80452981 - mmu_circ_0000819 9148 685 6 5 43 18 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_144802 Hnrpll Memczak2013, Rybak2015 chr15 82681942 82687714 - mmu_circ_0000629 5772 5772 8 7 18 3 mm_ES, mm_head, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_013836 Tcf20 Memczak2013, Rybak2015 chr6 119644588 119672326 - mmu_circ_0001513 27738 429 2 2 15 14 mm_head, PN_D21, P19_exp1_D0, forebrain, midbrain, cerebellum None ANNOTATED, CDS, coding, INTERNAL NM_053204 Erc1 Memczak2013, Rybak2015 chr14 22438112 22456862 + mmu_circ_0000506 18750 1023 2 2 2 5 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D0, forebrain, midbrain, hippocampus, hindbrain, PN_D14 None ANNOTATED, CDS, coding, INTERNAL NM_017479 Myst4 Memczak2013, Rybak2015 chr18 81106330 81114617 - mmu_circ_0000905 8287 8287 2 2 9 7 mm_ES, mm_brain1, P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, cerebellum, PN_D14, PN_D01 None INTERGENIC None None Memczak2013, Rybak2015 chr7 15164084 15194688 - mmu_circ_0014022 30604 1316 3 2 0 0 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000044683 Vmn1r90 Rybak2015 chr8 79974591 79974822 - mmu_circ_0001693 231 158 3 3 6 14 mm_ES, mm_head, mm_brain2, P19_exp1_D0, forebrain, cerebellum, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_030113 Arhgap10 Memczak2013, Rybak2015 chr13 23647351 23647468 + mmu_circ_0004529 117 117 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000045301 Hist1h1d Rybak2015 chr5 119043341 119043579 + mmu_circ_0001396 238 238 4 4 18 13 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_172424 Med13l Memczak2013, Rybak2015 chr2 148500074 148500180 + mmu_circ_0009426 106 106 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000109961 Nxt1 Rybak2015 chr13 97861772 97867666 + mmu_circ_0004924 5894 493 4 3 27 8 P19_exp1_D0, midbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000042517 Fam169a Rybak2015 chr17 13115507 13116180 + mmu_circ_0006546 673 188 3 3 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, hippocampus, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000129632 Tcp1 Rybak2015 chr7 140217395 140273543 - mmu_circ_0001643 56148 264 2 2 17 23 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp1_D0, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_009980 Ctbp2 Memczak2013, Rybak2015 chr14 24995617 25012176 - mmu_circ_0005128 16559 1064 2 2 11 7 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000164815 Dlg5 Rybak2015 chrX 49781616 49782311 - mmu_circ_0001876 695 695 3 3 54 0 mm_ES, PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, hindbrain, PN_D14 None ANNOTATED, CDS, coding, INTERNAL NM_016697 Gpc3 Memczak2013, Rybak2015 chr10 126727831 126732111 - mmu_circ_0002052 4280 4280 2 2 7 2 P19_exp1_D0 NA ALT_ACCEPTOR, ncRNA, OVERLAPTX, OVEXON, upstream_start ENSMUST00000174167 RP24-341K21.6 Rybak2015 chr6 38118090 38147089 - mmu_circ_0013350 28999 3857 2 2 5 2 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000169256 D630045J12Rik Rybak2015 chr4 89119321 89130031 + mmu_circ_0011849 10710 338 4 3 0 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000139272 Gm12610 Rybak2015 chr12 3437756 3437860 + mmu_circ_0003907 104 104 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000092003 Asxl2 Rybak2015 chr11 104285235 104287782 - mmu_circ_0002685 2547 2547 3 3 23 4 PN_D21, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, hippocampus, cerebellum, PN_D14 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON, UTR5 ENSMUST00000106977 1700081L11Rik Rybak2015 chr10 55391579 55434363 - mmu_circ_0002283 42784 42784 5 4 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0 NA INTERGENIC None None Rybak2015 chr2 70606918 70625052 - mmu_circ_0001031 18134 1333 6 6 5 27 mm_ES, mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_DONOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON NM_172664 Tlk1 Memczak2013, Rybak2015 chr10 80829734 80829896 + mmu_circ_0002484 162 162 2 2 0 0 P19_exp1_D0 NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000140901 Fzr1 Rybak2015 chr2 31889585 31889714 + mmu_circ_0009834 129 129 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000065398 Nup214 Rybak2015 chr16 46436466 46438181 - mmu_circ_0000689 1715 224 2 2 0 5 mm_head, mm_brain1, PN_D21, sy_cell, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_021496 Pvrl3 Memczak2013, Rybak2015 chr9 45677261 45677627 - mmu_circ_0001769 366 190 2 2 8 16 mm_ES, mm_head, mm_brain1, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14 None ANNOTATED, CDS, coding, INTERNAL NM_178709 Rnf214 Memczak2013, Rybak2015 chr10 59475209 59527156 + mmu_circ_0002313 51947 745 9 8 26 8 P19_exp2_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000164083 Ascc1 Rybak2015 chr17 39981642 39981812 + mmu_circ_0000765 170 170 2 2 0 0 mm_head, P19_exp1_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr15 88641726 88642589 - mmu_circ_0000635 863 328 4 3 0 0 mm_head, mm_brain1, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_001142357 Alg12 Memczak2013, Rybak2015 chr8 72775512 72776000 + mmu_circ_0014931 488 488 2 2 13 6 PN_D28, P19_exp1_D0, forebrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000131489 Sugp2 Rybak2015 chr19 25483575 25486254 + mmu_circ_0007641 2679 2679 2 2 8 4 P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, hippocampus, cerebellum NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000049400 Kank1 Rybak2015 chr5 34185760 34188916 + mmu_circ_0001335 3156 789 8 8 42 16 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, OVCODE, OVEXON, UTR5 NM_001081102 Whsc1 Memczak2013, Rybak2015 chr10 128000347 128000725 - mmu_circ_0002074 378 131 3 3 0 0 P19_exp1_D0, PN_D01 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000131728 Pa2g4 Rybak2015 chr2 139834434 139883235 - mmu_circ_0001076 48801 471 3 2 11 0 mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001159641 Tasp1 Memczak2013, Rybak2015 chr16 33421406 33435060 + mmu_circ_0000684 13654 567 4 4 5 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_011749 Zfp148 Memczak2013, Rybak2015 chr13 9121353 9136547 + mmu_circ_0004861 15194 474 2 2 20 14 P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000091829 Larp4b Rybak2015 chr1 180253264 180255444 - mmu_circ_0000117 2180 2180 3 3 0 2 mm_ES, mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None INTERGENIC None None Memczak2013, Rybak2015 chr16 13566662 13566831 - mmu_circ_0006068 169 169 2 2 25 19 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000058884 Parn Rybak2015 chr4 124475068 124475623 + mmu_circ_0011146 555 213 3 2 4 16 P19_exp1_D0 NA ANNOTATED, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000154015 Inpp5b Rybak2015 chr11 83318356 83318557 + mmu_circ_0003458 201 201 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000021018 Taf15 Rybak2015 chr13 55314564 55349438 + mmu_circ_0004667 34874 3816 2 2 25 23 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000099490 Nsd1 Rybak2015 chr17 66785419 66787731 - mmu_circ_0006941 2312 384 2 2 25 26 PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000097291 1110012J17Rik Rybak2015 chr2 118452588 118455901 + mmu_circ_0009210 3313 372 3 2 28 26 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000038341 Bub1b Rybak2015 chr10 44791864 44817320 + mmu_circ_0002228 25456 666 2 2 9 0 P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON ENSMUST00000099858 Prep Rybak2015 chr14 35149314 35149416 + mmu_circ_0005217 102 102 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000022322 Glud1 Rybak2015 chr7 119902897 119903153 + mmu_circ_0001612 256 256 3 3 15 15 mm_ES, mm_head, PN_D21, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hindbrain, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_001166584 Tead1 Memczak2013, Rybak2015 chr9 66881692 66881798 - mmu_circ_0015815 106 106 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000113690 Tpm1 Rybak2015 chr3 88811063 88847565 + mmu_circ_0010879 36502 1594 26 18 27 7 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000090933 Ash1l Rybak2015 chr11 72459038 72476675 + mmu_circ_0003328 17637 219 2 2 28 0 PN_D21, PN_D28, P19_exp1_D0, PN_D07, hippocampus, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000138247 Ube2g1 Rybak2015 chr4 144634863 144700944 - mmu_circ_0011395 66081 4349 2 2 42 16 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000036579 Vps13d Rybak2015 chr11 70466441 70467928 - mmu_circ_0003303 1487 118 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000018437 Pfn1 Rybak2015 chr10 59475209 59494391 + mmu_circ_0002311 19182 17649 2 2 5 8 P19_exp1_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON ENSMUST00000172124 Ascc1 Rybak2015 chr2 91770974 91771076 - mmu_circ_0010259 102 102 2 2 48 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000028672 Mdk Rybak2015 chr16 4179423 4180133 - mmu_circ_0006288 710 710 48 32 21 23 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, cerebellum, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023165 Crebbp Rybak2015 chr18 74938238 74938363 - mmu_circ_0007504 125 125 2 2 0 0 P19_exp1_D0, hippocampus NA ALT_ACCEPTOR, ALT_DONOR, ncRNA, OVEXON, upstream_start ENSMUST00000158610 SCARNA17 Rybak2015 chr8 47294625 47294751 + mmu_circ_0014843 126 126 5 5 0 0 P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D07, hippocampus, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000034049 Slc25a4 Rybak2015 chr17 84709226 84736222 - mmu_circ_0007059 26996 391 3 3 34 57 P19_exp1_D0, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000047524 Thada Rybak2015 chr1 182031155 182047874 + mmu_circ_0008510 16719 903 2 2 11 12 PN_D21, PN_D28, P19_exp1_D0, forebrain, midbrain, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000111117 Cdc42bpa Rybak2015 chr10 66620654 66652597 + mmu_circ_0000173 31943 279 4 4 30 5 mm_ES, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_207221 Jmjd1c Memczak2013, Rybak2015 chr6 100561729 100587116 - mmu_circ_0012890 25387 454 2 2 10 20 P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, midbrain, PN_D07, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000113312 Shq1 Rybak2015 chr7 109608804 109610197 + mmu_circ_0013733 1393 449 2 2 43 46 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000033283 Rrm1 Rybak2015 chr8 113625713 113640731 + mmu_circ_0014573 15018 1047 2 2 20 3 P19_exp1_D12, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000039333 Pdpr Rybak2015 chr16 32950377 32961830 + mmu_circ_0000681 11453 625 3 3 16 8 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001081255 Lrch3 Memczak2013, Rybak2015 chr13 49027665 49029447 - mmu_circ_0000462 1782 226 3 3 22 21 mm_head, mm_brain1, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_001033268 Fam120a Memczak2013, Rybak2015 chr1 120316016 120316495 + mmu_circ_0000066 479 479 2 2 26 14 mm_head, mm_brain2, P19_exp2_D12, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hindbrain, cerebellum, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_029709 Clasp1 Memczak2013, Rybak2015 chr19 38598404 38599942 + mmu_circ_0007761 1538 1538 9 9 40 18 PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hindbrain, cerebellum, PN_D14, PN_D01 NA ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start, UTR5 ENSMUST00000169713 Plce1 Rybak2015 chr11 96124125 96126159 + mmu_circ_0003575 2034 2034 20 15 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, downstream_end, OVCODE, OVEXON, UTR3 ENSMUST00000150490 Gm53 Rybak2015 chr4 149368577 149370490 - mmu_circ_0011434 1913 755 3 3 5 3 P19_exp2_D12, PN_D21, PN_D28, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000030830 H6pd Rybak2015 chr17 82047148 82048978 - mmu_circ_0000823 1830 1830 2 2 0 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None INTERGENIC None None Memczak2013, Rybak2015 chr8 72459677 72474653 - mmu_circ_0014921 14976 360 2 2 35 15 P19_exp1_D0, forebrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000065169 Gatad2a Rybak2015 chr9 96492368 96511918 - mmu_circ_0001829 19550 394 2 2 11 5 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_053268 Rasa2 Memczak2013, Rybak2015 chr14 51427174 51427325 - mmu_circ_0000534 151 151 7 6 0 0 mm_ES, mm_head, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA NR_002142 Rpph1 Memczak2013, Rybak2015 chr7 52474513 52476071 + mmu_circ_0001564 1558 230 2 2 30 27 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0 None ANNOTATED, CDS, coding, INTERNAL NM_011565 Tead2 Memczak2013, Rybak2015 chr5 100904707 100914874 - mmu_circ_0001368 10167 983 4 3 18 0 mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_172714 Lin54 Memczak2013, Rybak2015 chr8 79882445 79889059 - mmu_circ_0014985 6614 163 3 3 14 11 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000076316 Arhgap10 Rybak2015 chr16 4137365 4180133 - mmu_circ_0006285 42768 1242 3 3 25 23 P19_exp2_D12, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023165 Crebbp Rybak2015 chr2 146714756 146717020 + mmu_circ_0009414 2264 950 2 2 14 11 PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000099278 Plk1s1 Rybak2015 chr7 117170584 117175280 + mmu_circ_0001610 4696 395 4 3 58 39 mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_181517 Ipo7 Memczak2013, Rybak2015 chr11 70688247 70700673 + mmu_circ_0000282 12426 494 2 2 30 19 mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_019400 Rabep1 Memczak2013, Rybak2015 chr6 50093717 50113648 + mmu_circ_0001473 19931 716 2 2 41 5 mm_ES, mm_head, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001164734 Mpp6 Memczak2013, Rybak2015 chr2 91650186 91665509 + mmu_circ_0010257 15323 362 2 2 8 15 PN_D21, P19_exp1_D0, forebrain, midbrain, cerebellum NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000045705 Ambra1 Rybak2015 chr7 109333420 109334443 - mmu_circ_0013730 1023 132 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000096648 Nup98 Rybak2015 chr4 46482844 46484339 + mmu_circ_0011641 1495 105 6 5 0 0 P19_exp1_D4, P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000102926 Anp32b Rybak2015 chr17 84785850 84846065 - mmu_circ_0007063 60215 2993 5 4 55 7 P19_exp1_D2, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON ENSMUST00000047524 Thada Rybak2015 chr6 72565956 72566076 + mmu_circ_0013519 120 120 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, intronic, ncRNA, OVCODE, OVERLAPTX, OVEXON ENSMUST00000172588 RP23-335C3.6 Rybak2015 chr19 32773015 32781499 - mmu_circ_0007699 8484 510 2 2 0 21 P19_exp1_D0 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000070210 Atad1 Rybak2015 chr2 18023084 18047856 + mmu_circ_0000983 24772 459 2 2 20 11 mm_ES, mm_head, mm_brain1, mm_brain2, PN_D21, P19_exp2_D4, frontal_cortex, P19_exp1_D0, hippocampus, cerebellum None ANNOTATED, CDS, coding, INTERNAL NM_001252560 Mllt10 Memczak2013, Rybak2015 chr4 48649711 48663290 + mmu_circ_0001206 13579 339 2 2 49 32 mm_ES, mm_head, mm_brain1, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_021436 Tmeff1 Memczak2013, Rybak2015 chr17 30650500 30667310 - mmu_circ_0000738 16810 1181 4 4 0 12 mm_ES, mm_brain1, PN_D21, sy_cell, PN_D28, frontal_cortex, P19_exp1_D2, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_172618 Btbd9 Memczak2013, Rybak2015 chr2 120359246 120361415 - mmu_circ_0001062 2169 2169 2 2 44 37 mm_head, P19_exp2_D12, olfactory_bulb, P19_exp1_D0, PN_D07, sy_snpt, hindbrain, cerebellum, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_011743 Zfp106 Memczak2013, Rybak2015 chr6 134012081 134016483 + mmu_circ_0001528 4402 4402 4 4 11 0 mm_ES, P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, sy_snpt, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic NM_007961 Etv6 Memczak2013, Rybak2015 chr11 84708051 84711222 + mmu_circ_0003477 3171 568 2 2 4 6 P19_exp1_D0 NA ANNOTATED, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000141173 Myo19 Rybak2015 chr7 129256763 129267222 - mmu_circ_0013841 10459 599 2 2 5 10 P19_exp2_D4, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000098068 Palb2 Rybak2015 chr12 83441648 83443486 + mmu_circ_0000400 1838 1838 2 2 11 15 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001167983 Sipa1l1 Memczak2013, Rybak2015 chr11 6213790 6217083 + mmu_circ_0000231 3293 295 6 5 31 42 mm_ES, mm_head, P19_exp2_D12, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001252287 Ogdh Memczak2013, Rybak2015 chr17 65941630 65944394 - mmu_circ_0000805 2764 338 4 4 81 52 mm_ES, mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_013933 Vapa Memczak2013, Rybak2015 chr8 107702492 107726478 + mmu_circ_0014501 23986 361 2 2 12 21 PN_D21, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D0, forebrain, PN_D07, hindbrain, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000109392 Cbfb Rybak2015 chr18 74129544 74130930 - mmu_circ_0000895 1386 1386 9 8 7 9 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_172632 Mapk4 Memczak2013, Rybak2015 chr6 82680761 82689668 - mmu_circ_0001485 8907 1344 7 6 49 47 mm_ES, mm_head, P19_exp1_D0 None ANNOTATED, CDS, coding, INTERNAL NM_013820 Hk2 Memczak2013, Rybak2015 chr4 13762779 13774104 + mmu_circ_0001183 11325 652 2 2 11 7 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_001111026 Runx1t1 Memczak2013, Rybak2015 chr11 103248271 103248662 - mmu_circ_0002664 391 391 2 2 10 15 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000041272 Plekhm1 Rybak2015 chr2 166765134 166766992 + mmu_circ_0009595 1858 544 2 2 51 45 P19_exp2_D12, PN_D21, P19_exp2_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000002790 Cse1l Rybak2015 chr9 63464492 63467038 + mmu_circ_0001792 2546 462 2 2 19 6 mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_025857 Aagab Memczak2013, Rybak2015 chr5 65957227 65972707 + mmu_circ_0012726 15480 236 2 2 67 55 P19_exp2_D4, P19_exp1_D0, forebrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000142407 Ube2k Rybak2015 chr1 183050485 183054115 - mmu_circ_0008521 3630 263 2 2 32 18 frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000027797 Nvl Rybak2015 chr16 17013400 17016173 + mmu_circ_0000668 2773 2773 3 3 58 0 mm_ES, mm_head, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01 None ALT_ACCEPTOR, CDS, coding, INTERNAL, intronic NM_001038663 Mapk1 Memczak2013, Rybak2015 chrX 95822252 95840333 - mmu_circ_0001888 18081 410 2 2 19 21 mm_head, mm_brain2, P19_exp1_D0 None ANNOTATED, CDS, coding, INTERNAL NM_052976 Ophn1 Memczak2013, Rybak2015 chr5 111078123 111078431 - mmu_circ_0011989 308 156 3 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000042147 Noc4l Rybak2015 chr6 134819956 134820061 - mmu_circ_0013122 105 105 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000116515 Gpr19 Rybak2015 chr1 38110460 38142497 - mmu_circ_0000028 32037 2431 4 4 4 12 mm_ES, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON NM_019570 Rev1 Memczak2013, Rybak2015 chr13 81613930 81621070 - mmu_circ_0004822 7140 1034 3 3 6 9 P19_exp2_D12, P19_exp2_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000095585 Gpr98 Rybak2015 chr16 91658716 91658857 - mmu_circ_0006455 141 141 3 3 0 0 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, P19_exp1_D0, midbrain, hippocampus, cerebellum, PN_D14, PN_D01 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000117633 Son Rybak2015 chr1 89776942 89778514 + mmu_circ_0000058 1572 192 4 3 26 21 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_177646 Dgkd Memczak2013, Rybak2015 chr14 32629265 32630523 - mmu_circ_0005204 1258 1258 2 2 3 0 P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000014640 Ankrd28 Rybak2015 chrX 139186582 139268936 + mmu_circ_0001894 82354 506 2 2 0 8 mm_head, mm_brain2, PN_D21, PN_D28, frontal_cortex, P19_exp1_D0, forebrain, midbrain None ANNOTATED, CDS, coding, INTERNAL, UTR3, UTR5 NM_001199357 Tmem164 Memczak2013, Rybak2015 chrX 73031733 73031869 + mmu_circ_0016372 136 136 2 2 0 0 sy_cell, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0, sy_cyto NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000033547 Pls3 Rybak2015 chr11 69463229 69465225 + mmu_circ_0000277 1996 825 4 4 30 52 mm_ES, mm_head, P19_exp2_D12, PN_D21, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_011814 Fxr2 Memczak2013, Rybak2015 chr14 31874654 31888168 + mmu_circ_0005192 13514 1238 2 2 38 37 P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000112095 Pbrm1 Rybak2015 chr15 61980793 62007481 + mmu_circ_0005723 26688 706 2 2 0 0 P19_exp1_D0 NA ALT_DONOR, INTERNAL, intronic, ncRNA, OVEXON ENSMUST00000100633 Pvt1 Rybak2015 chr15 12819373 12835456 + mmu_circ_0005542 16083 571 2 2 22 33 P19_exp1_D2, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000169061 Drosha Rybak2015 chr11 54357080 54381998 + mmu_circ_0003133 24918 426 2 2 17 6 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000102743 Rapgef6 Rybak2015 chr10 116792990 116805044 - mmu_circ_0000215 12054 1599 4 4 50 26 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 NM_001013391 Cpsf6 Memczak2013, Rybak2015 chr2 18031408 18047856 + mmu_circ_0009663 16448 404 2 2 20 18 PN_D21, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000114671 Mllt10 Rybak2015 chr14 58352714 58353255 - mmu_circ_0005309 541 541 2 2 5 3 P19_exp1_D12, P19_exp1_D0, forebrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000022531 Lats2 Rybak2015 chr19 4784723 4785567 - mmu_circ_0000917 844 844 2 2 0 6 mm_ES, mm_head, mm_brain1, mm_brain2, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, cerebellum, PN_D14, PN_D01 None ALT_DONOR, coding, INTERNAL, OVEXON, UTR3 NM_009032 Rbm4 Memczak2013, Rybak2015 chr11 5229881 5238766 - mmu_circ_0000228 8885 8885 2 2 0 0 mm_ES, mm_head, mm_brain2, PN_D21, P19_exp1_D0, midbrain, cerebellum None ALT_DONOR, CDS, coding, INTERNAL, intronic NM_001080924 Znrf3 Memczak2013, Rybak2015 chr12 4664820 4673132 + mmu_circ_0003999 8312 765 2 2 5 7 PN_D28, P19_exp1_D0, forebrain, midbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000062580 Itsn2 Rybak2015 chr4 87767173 87774956 + mmu_circ_0001231 7783 319 4 3 24 0 mm_brain1, mm_brain2, sy_cell, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, forebrain, sy_snpt None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001081184 BC057079 Memczak2013, Rybak2015 chr2 72808211 72809571 - mmu_circ_0010164 1360 1360 2 2 25 12 P19_exp2_D12, olfactory_bulb, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hindbrain, cerebellum, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000102689 Sp3 Rybak2015 chr9 83882382 83906226 + mmu_circ_0001822 23844 608 2 2 32 27 mm_head, mm_brain1, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_199195 Bckdhb Memczak2013, Rybak2015 chr13 74613139 74639879 + mmu_circ_0004787 26740 26740 2 2 0 0 P19_exp1_D0 NA ANTISENSE, CDS, coding, downstream_end, OVCODE, OVEXON, upstream_start ENSMUST00000074369 Zfp825 Rybak2015 chr4 133275451 133278966 - mmu_circ_0001283 3515 780 2 2 40 19 mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001080819 Arid1a Memczak2013, Rybak2015 chr9 14397197 14401044 - mmu_circ_0015414 3847 1108 2 2 6 12 P19_exp2_D12, PN_D21, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hindbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000160770 Amotl1 Rybak2015 chr10 119366956 119382227 + mmu_circ_0000216 15271 588 3 3 8 4 mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, PN_D14, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_130891 Grip1 Memczak2013, Rybak2015 chr5 108617950 108626989 + mmu_circ_0011973 9039 806 2 2 4 0 P19_exp1_D0, forebrain, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000047677 Ccdc18 Rybak2015 chr10 59475209 59560962 + mmu_circ_0002314 85753 867 3 3 24 8 P19_exp2_D4, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000164083 Ascc1 Rybak2015 chrX 166364885 166365601 + mmu_circ_0016236 716 716 5 5 8 16 P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000112105 Mid1 Rybak2015 chr6 3495509 3505466 + mmu_circ_0013304 9957 419 2 2 17 13 PN_D28, P19_exp1_D12, P19_exp1_D0, forebrain, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000164052 Ccdc132 Rybak2015 chr13 28760238 28822372 - mmu_circ_0004555 62134 61057 3 3 18 13 P19_exp1_D0 NA ALT_ACCEPTOR, INTERNAL, intronic, ncRNA, OVEXON ENSMUST00000148885 2610307P16Rik Rybak2015 chr4 144644019 144647465 - mmu_circ_0011396 3446 396 2 2 27 48 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000036579 Vps13d Rybak2015 chr5 111182822 111185785 - mmu_circ_0001387 2963 2963 7 6 2 13 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_DONOR, CDS, coding, INTERNAL, intronic, OVCODE, OVEXON, UTR5 NM_029337 Ep400 Memczak2013, Rybak2015 chr7 52171210 52171840 - mmu_circ_0001561 630 406 3 3 27 20 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_007458 Ap2a1 Memczak2013, Rybak2015 chr4 58874396 58898370 - mmu_circ_0001213 23974 1031 2 2 31 17 mm_head, mm_brain1, sy_cell, P19_exp1_D0, forebrain, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_172381 AI314180 Memczak2013, Rybak2015 chr13 42150768 42218582 + mmu_circ_0000456 67814 197 2 2 10 8 mm_head, mm_brain1, PN_D21, P19_exp2_D4, P19_exp1_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_007772 Hivep1 Memczak2013, Rybak2015 chr2 18014410 18068499 + mmu_circ_0009660 54089 606 5 3 27 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR5 ENSMUST00000114671 Mllt10 Rybak2015 chr12 88687657 88691335 - mmu_circ_0004318 3678 219 2 2 25 33 P19_exp1_D0, forebrain, PN_D07 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000021424 Sptlc2 Rybak2015 chr16 14138435 14140465 - mmu_circ_0000664 2030 369 2 2 6 11 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001081154 4921513D23Rik Memczak2013, Rybak2015 chr1 88253795 88253906 - mmu_circ_0009032 111 111 6 6 0 0 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D07, hippocampus, PN_D01, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000027438 Ncl Rybak2015 chr1 121464372 121475654 - mmu_circ_0008099 11282 456 2 2 14 18 P19_exp2_D12, PN_D21, P19_exp2_D4, P19_exp1_D0, forebrain, PN_D07, hindbrain, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000163147 Epb4.1l5 Rybak2015 chr1 38591750 38593791 - mmu_circ_0008717 2041 820 2 2 0 10 PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000039827 Aff3 Rybak2015 chr1 93281141 93281923 - mmu_circ_0000062 782 201 6 4 32 26 mm_head, mm_brain1, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_023343 Ilkap Memczak2013, Rybak2015 chr11 104229993 104240140 - mmu_circ_0000330 10147 241 4 4 13 23 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001081045 1700081L11Rik Memczak2013, Rybak2015 chr1 183886524 183892050 - mmu_circ_0000127 5526 344 2 2 37 13 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_008680 Enah Memczak2013, Rybak2015 chr1 89260678 89276583 + mmu_circ_0000057 15905 494 4 4 16 33 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_146112 Gigyf2 Memczak2013, Rybak2015 chr11 74742494 74803717 + mmu_circ_0000288 61223 2778 2 2 21 18 mm_ES, mm_head, P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, hippocampus, hindbrain, cerebellum, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001002764 Smg6 Memczak2013, Rybak2015 chr12 4968023 5013597 + mmu_circ_0000355 45574 1171 2 2 10 6 mm_head, mm_brain1, P19_exp2_D12, PN_D21, PN_D28, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_001099628 Atad2b Memczak2013, Rybak2015 chr6 134491669 134492063 - mmu_circ_0013120 394 394 2 2 12 12 P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000032322 Lrp6 Rybak2015 chr15 93254444 93295676 + mmu_circ_0000640 41232 672 3 3 47 30 mm_ES, mm_head, PN_D21, PN_D28, P19_exp1_D0, forebrain None ANNOTATED, CDS, coding, INTERNAL NM_146062 Pphln1 Memczak2013, Rybak2015 chr7 91781165 91782919 - mmu_circ_0001591 1754 381 3 2 11 22 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hindbrain, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_022985 Zfand6 Memczak2013, Rybak2015 chr10 86154373 86154487 - mmu_circ_0002522 114 114 2 2 110 0 P19_exp1_D0 NA ALT_ACCEPTOR, INTERNAL, ncRNA, OVCODE, OVERLAPTX, OVEXON ENSMUST00000129178 Hsp90b1 Rybak2015 chr4 57722322 57723015 + mmu_circ_0001212 693 693 2 2 0 0 mm_head, P19_exp2_D12, P19_exp1_D0, forebrain, hippocampus, P19_exp2_D0 None ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON NM_172868 Palm2 Memczak2013, Rybak2015 chr18 83124915 83126841 + mmu_circ_0000909 1926 1926 2 2 10 6 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, PN_D14, sy_cyto None INTERGENIC None None Memczak2013, Rybak2015 chr5 107047089 107048661 - mmu_circ_0001378 1572 461 2 2 0 16 mm_head, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ALT_DONOR, CDS, coding, INTERNAL, UTR3 NM_026856 Zfp644 Memczak2013, Rybak2015 chr1 157021115 157044565 + mmu_circ_0000091 23450 656 9 9 11 11 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_021433 Stx6 Memczak2013, Rybak2015 chr14 58475446 58484478 - mmu_circ_0005312 9032 345 2 2 10 19 PN_D21, P19_exp1_D0, forebrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000089473 Zdhhc20 Rybak2015 chr5 111775502 111778594 + mmu_circ_0001390 3092 259 3 2 36 0 mm_ES, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_019640 Pitpnb Memczak2013, Rybak2015 chr12 13226166 13226355 + mmu_circ_0003808 189 189 3 3 0 0 P19_exp1_D0, P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000071103 Ddx1 Rybak2015 chr5 137753101 137753461 - mmu_circ_0012217 360 264 3 2 39 28 P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000168426 Trip6 Rybak2015 chr17 39981642 39981845 + mmu_circ_0006755 203 203 3 3 0 0 sy_cell, P19_exp1_D4, P19_exp1_D0 NA INTERGENIC None None Rybak2015 chr3 55883780 55895042 - mmu_circ_0001132 11262 945 3 3 11 8 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_030595 Nbea Memczak2013, Rybak2015 chr3 119450509 119464696 - mmu_circ_0010401 14187 669 2 2 44 8 P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000029780 Ptbp2 Rybak2015 chr12 25563055 25567659 + mmu_circ_0000362 4604 224 4 4 17 13 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_026037 Mboat2 Memczak2013, Rybak2015 chr12 13291988 13317110 + mmu_circ_0000360 25122 704 2 2 5 11 mm_head, mm_brain2, PN_D21, P19_exp1_D0, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_027706 Nbas Memczak2013, Rybak2015 chr9 96503131 96511918 - mmu_circ_0001830 8787 317 2 2 8 5 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_053268 Rasa2 Memczak2013, Rybak2015 chr1 38591750 38595846 - mmu_circ_0000030 4096 2875 2 2 0 0 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ALT_ACCEPTOR, CDS, coding, INTERNAL, intronic NM_010678 Aff3 Memczak2013, Rybak2015 chr4 59703015 59704210 + mmu_circ_0001215 1195 1195 2 2 10 7 mm_ES, mm_brain1, mm_brain2, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hindbrain, cerebellum None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_001015681 E130308A19Rik Memczak2013, Rybak2015 chr4 48617452 48630203 + mmu_circ_0001204 12751 364 8 8 32 27 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_021436 Tmeff1 Memczak2013, Rybak2015 chr6 122678572 122678686 - mmu_circ_0013054 114 114 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, ncRNA, OVEXON ENSMUST00000168704 Slc2a3 Rybak2015 chr2 32778109 32778446 - mmu_circ_0009862 337 337 2 2 0 0 P19_exp1_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000028135 Fam129b Rybak2015 chr15 102130233 102134576 + mmu_circ_0000652 4343 443 3 3 17 24 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001014976 Espl1 Memczak2013, Rybak2015 chr2 104449027 104449343 + mmu_circ_0001053 316 198 4 3 5 20 mm_ES, mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_145529 Cstf3 Memczak2013, Rybak2015 chr11 53085515 53105816 - mmu_circ_0003119 20301 1137 2 2 76 26 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000020630 Hspa4 Rybak2015 chr5 147574776 147580593 - mmu_circ_0012342 5817 295 2 2 9 10 P19_exp1_D0, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000085614 Usp12 Rybak2015 chr5 30593498 30593666 - mmu_circ_0012524 168 168 2 2 0 0 P19_exp1_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000145167 Ept1 Rybak2015 chr18 25498214 25503463 + mmu_circ_0000857 5249 770 2 2 6 6 mm_brain1, PN_D21, sy_cell, PN_D28, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001033532 AW554918 Memczak2013, Rybak2015 chr16 11230602 11239189 - mmu_circ_0006058 8587 814 2 2 45 9 P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000167571 Gspt1 Rybak2015 chr4 130274068 130275266 + mmu_circ_0001272 1198 288 5 4 28 14 mm_ES, mm_head, P19_exp2_D12, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001159603 Pum1 Memczak2013, Rybak2015 chr9 3475482 3477962 + mmu_circ_0015539 2480 248 2 2 0 9 P19_exp2_D4, P19_exp1_D0, forebrain NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000027027 Cwf19l2 Rybak2015 chr2 44965535 44968612 - mmu_circ_0009979 3077 412 2 2 17 2 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR5 ENSMUST00000076836 Zeb2 Rybak2015 chr16 87715575 87722853 + mmu_circ_0006436 7278 1845 3 3 36 21 PN_D21, P19_exp1_D12, P19_exp1_D0, midbrain, hindbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000026703 Bach1 Rybak2015 chr14 35504867 35508291 + mmu_circ_0000522 3424 1172 3 3 41 28 mm_head, mm_brain1, P19_exp2_D12, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001004436 Wapal Memczak2013, Rybak2015 chr4 126600307 126603267 - mmu_circ_0001261 2960 755 5 5 24 7 mm_ES, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001114399 Zmym4 Memczak2013, Rybak2015 chr15 41629019 41657598 + mmu_circ_0005665 28579 1715 2 2 11 6 PN_D28, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, hippocampus, sy_snpt, cerebellum, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000110297 Oxr1 Rybak2015 chr2 68196870 68248198 - mmu_circ_0001027 51328 881 2 2 23 15 mm_head, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_016866 Stk39 Memczak2013, Rybak2015 chr2 6312100 6315601 + mmu_circ_0010087 3501 151 2 2 6 12 PN_D21, PN_D28, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, midbrain, cerebellum, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000114937 Usp6nl Rybak2015 chr4 35031018 35031638 - mmu_circ_0011582 620 620 6 6 6 6 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000102975 Mobkl2b Rybak2015 chr3 119443232 119464696 - mmu_circ_0010399 21464 865 23 14 17 8 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000029780 Ptbp2 Rybak2015 chr1 192695470 192712643 - mmu_circ_0008562 17173 570 2 2 10 14 PN_D21, sy_cell, frontal_cortex, P19_exp1_D0, forebrain, hippocampus, sy_snpt, hindbrain, PN_D14 NA ANNOTATED, coding, INTERNAL, OVCODE, OVEXON, UTR3 ENSMUST00000159367 Rps6kc1 Rybak2015 chr5 28684813 28694853 + mmu_circ_0001329 10040 557 2 2 8 17 mm_head, mm_brain1, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_028234 Rbm33 Memczak2013, Rybak2015 chr9 120867709 120868647 + mmu_circ_0015388 938 938 2 2 0 76 P19_exp1_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVEXON, UTR3 ENSMUST00000133689 Ctnnb1 Rybak2015 chr7 89038684 89050522 - mmu_circ_0001589 11838 519 2 2 13 4 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_013886 Hdgfrp3 Memczak2013, Rybak2015 chr2 68228970 68248198 - mmu_circ_0001028 19228 420 3 2 26 15 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_016866 Stk39 Memczak2013, Rybak2015 chr9 3634438 3635157 + mmu_circ_0001741 719 719 2 2 0 2 mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001033322 Gucy1a2 Memczak2013, Rybak2015 chr16 62769432 62770638 - mmu_circ_0006361 1206 277 2 2 5 4 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000063089 Nsun3 Rybak2015 chr6 122677961 122678173 + mmu_circ_0013053 212 212 3 3 0 0 P19_exp1_D0 NA ANTISENSE, INTERNAL, ncRNA, OVEXON ENSMUST00000168704 Slc2a3 Rybak2015 chr1 152253591 152254707 + mmu_circ_0000086 1116 262 2 2 20 41 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_133780 Tpr Memczak2013, Rybak2015 chr7 151640580 151640691 - mmu_circ_0014021 111 111 2 2 30 19 PN_D21, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D07, hippocampus, PN_D14, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000103079 Cttn Rybak2015 chr18 74938075 74938238 - mmu_circ_0007503 163 163 4 4 0 0 PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, ncRNA, OVEXON, upstream_start ENSMUST00000158064 Scarna17 Rybak2015 chr11 108295439 108301910 + mmu_circ_0002745 6471 478 7 6 5 14 P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000061287 Ccdc46 Rybak2015 chr6 88305476 88308636 - mmu_circ_0001491 3160 262 3 2 8 14 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_023060 Eefsec Memczak2013, Rybak2015 chr8 42341349 42344660 + mmu_circ_0014821 3311 631 2 2 20 17 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000045199 Pcm1 Rybak2015 chr2 144081075 144082931 - mmu_circ_0001083 1856 278 2 2 10 90 mm_ES, mm_brain1, P19_exp1_D2, P19_exp1_D0 None ANNOTATED, CDS, coding, INTERNAL NM_001199188 Snx5 Memczak2013, Rybak2015 chr18 31795635 31795753 + mmu_circ_0007221 118 118 4 3 22 13 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000025109 Sap130 Rybak2015 chr13 42150768 42150911 + mmu_circ_0000455 143 143 5 5 10 8 mm_ES, mm_head, PN_D21, sy_cell, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_007772 Hivep1 Memczak2013, Rybak2015 chr4 73926800 73961553 + mmu_circ_0011768 34753 601 3 3 37 33 PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000030102 Kdm4c Rybak2015 chr19 60842475 60842658 - mmu_circ_0007998 183 183 3 3 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025955 Eif3a Rybak2015 chr2 168530622 168536476 - mmu_circ_0009619 5854 368 5 5 13 11 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000109175 Atp9a Rybak2015 chr9 68524455 68524937 + mmu_circ_0015825 482 482 2 2 0 0 P19_exp1_D12, P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000034766 Rora Rybak2015 chr17 84785850 84815727 - mmu_circ_0000826 29877 29877 4 4 55 76 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, P19_exp2_D0 None INTERGENIC None None Memczak2013, Rybak2015 chr17 74751292 74755509 + mmu_circ_0006990 4217 168 2 2 18 17 P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000024869 Spast Rybak2015 chr17 88116794 88118145 + mmu_circ_0007085 1351 451 5 4 41 34 P19_exp1_D12, P19_exp1_D0, cerebellum NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000024967 Msh2 Rybak2015 chr2 119747101 119747578 + mmu_circ_0001060 477 237 2 2 19 23 mm_ES, mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, midbrain, PN_D07, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_013720 Mga Memczak2013, Rybak2015 chr7 75309878 75318261 + mmu_circ_0014368 8383 610 2 2 21 0 olfactory_bulb, P19_exp1_D0, midbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000005671 Igf1r Rybak2015 chr11 43518035 43518979 + mmu_circ_0000254 944 944 6 6 12 11 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001164231 Pwwp2a Memczak2013, Rybak2015 chr4 144606637 144700944 - mmu_circ_0011392 94307 4678 9 9 25 16 P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000036579 Vps13d Rybak2015 chr1 179027097 179061227 - mmu_circ_0008482 34130 515 2 2 14 0 PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D0, forebrain, PN_D07, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000111159 Akt3 Rybak2015 chr13 64344941 64349807 - mmu_circ_0000474 4866 355 13 11 27 3 mm_ES, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001122989 Cdc14b Memczak2013, Rybak2015 chr9 100605571 100612959 + mmu_circ_0001832 7388 205 2 2 30 29 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_009282 Stag1 Memczak2013, Rybak2015 chr1 94044832 94045071 - mmu_circ_0000064 239 239 4 4 15 0 mm_head, mm_brain1, PN_D21, olfactory_bulb, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, PN_D14, PN_D01, sy_cyto None ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start, UTR5 NM_207225 Hdac4 Memczak2013, Rybak2015 chr8 123181928 123184760 - mmu_circ_0014642 2832 462 2 2 0 40 P19_exp1_D0, PN_D14 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR3 ENSMUST00000034277 Cox4nb Rybak2015 chr11 35630138 35630248 - mmu_circ_0003000 110 110 2 2 53 51 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000018992 Rars Rybak2015 chr13 23831176 23831335 + mmu_circ_0004536 159 159 3 3 0 0 P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, PN_D14 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000040914 Hist1h1c Rybak2015 chr19 57703574 57731728 + mmu_circ_0007921 28154 1239 2 2 15 11 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000077282 Atrnl1 Rybak2015 chr9 72439557 72441167 + mmu_circ_0001804 1610 206 3 3 5 4 mm_ES, mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001033536 Rfx7 Memczak2013, Rybak2015 chr4 153394129 153394289 + mmu_circ_0011485 160 160 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000169622 Lrrc47 Rybak2015 chr4 83937596 83939566 - mmu_circ_0001223 1970 1970 7 6 2 8 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hindbrain, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_172870 Bnc2 Memczak2013, Rybak2015 chr12 114059780 114059888 - mmu_circ_0003783 108 108 3 2 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000062092 Cdca4 Rybak2015 chr2 92054205 92070881 + mmu_circ_0001047 16676 396 2 2 20 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001109691 Phf21a Memczak2013, Rybak2015 chr11 70688247 70698470 + mmu_circ_0000281 10223 333 4 4 35 19 mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_019400 Rabep1 Memczak2013, Rybak2015 chr17 6137210 6139156 + mmu_circ_0000723 1946 1946 20 9 16 4 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ALT_ACCEPTOR, CDS, coding, OVCODE, OVEXON, upstream_start, UTR5 NM_054040 Tulp4 Memczak2013, Rybak2015 chr9 99396569 99438178 - mmu_circ_0016038 41609 1603 3 3 18 15 PN_D21, sy_cell, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000035043 Armc8 Rybak2015 chr10 126504495 126504601 + mmu_circ_0002045 106 106 2 2 0 0 PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, PN_D07, hippocampus, PN_D14, PN_D01, sy_cyto NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, OVERLAPTX, OVEXON, UTR3 ENSMUST00000006911 Cdk4 Rybak2015 chr2 18043871 18047856 + mmu_circ_0009666 3985 294 2 2 20 18 PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, hindbrain, cerebellum, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000114671 Mllt10 Rybak2015 chr14 47635951 47636470 + mmu_circ_0000529 519 519 7 6 22 0 mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001037221 Samd4 Memczak2013, Rybak2015 chr2 144081075 144083729 - mmu_circ_0009406 2654 1076 2 2 10 79 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07 NA ANNOTATED, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000153033 Snx5 Rybak2015 chr10 59475209 59476522 + mmu_circ_0002310 1313 277 4 4 33 8 P19_exp1_D2, P19_exp1_D0, midbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000164083 Ascc1 Rybak2015 chr19 4787360 4788042 - mmu_circ_0000920 682 682 2 2 6 0 mm_ES, P19_exp1_D0 None ANNOTATED, CDS, coding, INTERNAL, UTR3 NM_009032 Rbm4 Memczak2013, Rybak2015 chr7 30972028 30972174 + mmu_circ_0014135 146 146 3 2 0 0 P19_exp1_D0 NA ANTISENSE, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000001845 Capns1 Rybak2015 chr18 75274443 75286573 + mmu_circ_0000898 12130 697 3 2 9 14 mm_ES, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_027727 Dym Memczak2013, Rybak2015 chr9 114614171 114618432 + mmu_circ_0015352 4261 518 3 3 51 50 PN_D21, sy_cell, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, sy_snpt NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000047404 Dync1li1 Rybak2015 chr11 100986283 101021710 + mmu_circ_0002637 35427 35347 18 12 0 0 PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, PN_D14 NA ALT_DONOR, downstream_end, ncRNA, OVCODE, OVEXON ENSMUST00000137844 Tubg1 Rybak2015 chr17 28565296 28577998 - mmu_circ_0006655 12702 529 2 2 23 5 PN_D21, PN_D28, P19_exp1_D0, forebrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000114792 Fkbp5 Rybak2015 chr7 133702366 133702476 - mmu_circ_0013881 110 110 4 4 77 0 P19_exp2_D4, P19_exp1_D0, hippocampus NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000032992 Eif3c Rybak2015 chr16 58424673 58433576 + mmu_circ_0000693 8903 366 3 3 9 15 mm_ES, mm_head, P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_028523 Dcbld2 Memczak2013, Rybak2015 chr9 21561560 21561834 - mmu_circ_0001752 274 178 2 2 23 0 mm_ES, mm_head, P19_exp2_D12, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, hindbrain, PN_D01 None ALT_ACCEPTOR, CDS, coding, INTERNAL NM_026282 Spc24 Memczak2013, Rybak2015 chr2 90374031 90374136 - mmu_circ_0010225 105 105 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000169760 Ptprj Rybak2015 chr12 35770610 35792228 + mmu_circ_0003937 21618 1369 2 2 3 8 PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000048519 Snx13 Rybak2015 chr15 3985259 3987181 + mmu_circ_0005659 1922 200 2 2 21 20 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000110690 Oxct1 Rybak2015 chr8 86216661 86216781 + mmu_circ_0015033 120 120 3 3 0 0 P19_exp1_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000005616 Pkn1 Rybak2015 chr9 45781024 45786812 - mmu_circ_0001770 5788 418 2 2 26 36 mm_head, P19_exp2_D12, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hippocampus, cerebellum, PN_D14, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_008775 Pafah1b2 Memczak2013, Rybak2015 chr19 42637041 42638831 + mmu_circ_0000953 1790 1790 4 4 8 0 mm_ES, mm_head, mm_brain1, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, hippocampus, cerebellum, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_177464 D19Ertd386e Memczak2013, Rybak2015 chr11 53097030 53105816 - mmu_circ_0003120 8786 556 2 2 67 26 P19_exp1_D0, sy_snpt, cerebellum NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000020630 Hspa4 Rybak2015 chr6 47526534 47527666 - mmu_circ_0001471 1132 253 3 3 21 16 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_007971 Ezh2 Memczak2013, Rybak2015 chr18 61316996 61317415 - mmu_circ_0007421 419 419 2 2 23 10 frontal_cortex, P19_exp1_D0, forebrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025524 Hmgxb3 Rybak2015 chr9 64008627 64009248 - mmu_circ_0015779 621 227 6 6 17 13 P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000122091 Zwilch Rybak2015 chr1 54705720 54705823 - mmu_circ_0008790 103 103 2 2 0 0 P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000044359 Ankrd44 Rybak2015 chr2 139803342 139883235 - mmu_circ_0001073 79893 743 4 3 10 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001159641 Tasp1 Memczak2013, Rybak2015 chr7 128191351 128200913 + mmu_circ_0001624 9562 586 3 3 30 20 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_021554 Mettl9 Memczak2013, Rybak2015 chr1 24039501 24051108 - mmu_circ_0008601 11607 230 2 2 6 10 olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000027337 Fam135a Rybak2015 chr8 89384324 89386009 - mmu_circ_0001711 1685 1685 3 3 21 13 mm_ES, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_030563 N4bp1 Memczak2013, Rybak2015 chr9 108436019 108436121 + mmu_circ_0015258 102 102 4 4 0 0 P19_exp2_D12, PN_D21, sy_cell, frontal_cortex, P19_exp1_D0, PN_D07, hippocampus, cerebellum, PN_D01 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000006851 Qrich1 Rybak2015 chr1 167534740 167538735 - mmu_circ_0000114 3995 514 5 5 30 15 mm_head, mm_brain1, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001083897 Mpzl1 Memczak2013, Rybak2015 chr11 7030278 7039192 + mmu_circ_0003297 8914 585 13 11 31 9 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000020706 Adcy1 Rybak2015 chr10 45138942 45140514 - mmu_circ_0000165 1572 257 6 6 21 21 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, PN_D14, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL NM_001031772 Lin28b Memczak2013, Rybak2015 chr15 52919609 52939126 - mmu_circ_0000600 19517 670 2 2 12 0 mm_head, mm_brain2, PN_D21, frontal_cortex, P19_exp1_D0, PN_D07, PN_D14 None ANNOTATED, CDS, coding, INTERNAL NM_010162 Ext1 Memczak2013, Rybak2015 chr6 128384322 128384432 - mmu_circ_0013103 110 110 2 2 112 0 P19_exp1_D0 NA ALT_ACCEPTOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000139448 Fkbp4 Rybak2015 chr6 122283308 122287033 - mmu_circ_0013049 3725 507 2 2 82 47 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR3, UTR5 ENSMUST00000161877 Phc1 Rybak2015 chr11 117151711 117152350 + mmu_circ_0002788 639 639 3 3 27 11 P19_exp1_D0, midbrain, hindbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000106354 Sep-09 Rybak2015 chr12 107274749 107281102 + mmu_circ_0000413 6353 221 2 2 18 13 mm_ES, mm_brain1, PN_D28, P19_exp1_D0, forebrain, hippocampus None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_011705 Vrk1 Memczak2013, Rybak2015 chr7 53321531 53334962 + mmu_circ_0014220 13431 1270 2 2 26 34 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000033121 Nomo1 Rybak2015 chr14 55571082 55598399 - mmu_circ_0005286 27317 16499 3 2 0 0 P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, CDS, coding, OVCODE, OVERLAPTX, OVEXON, upstream_start, UTR5 ENSMUST00000145322 Myh6 Rybak2015 chr15 93285881 93295676 + mmu_circ_0005987 9795 341 4 2 47 42 P19_exp2_D4, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000049122 Pphln1 Rybak2015 chr12 52748980 52762700 - mmu_circ_0000372 13720 703 2 2 36 19 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_052973 Strn3 Memczak2013, Rybak2015 chr6 37853532 37881500 + mmu_circ_0013341 27968 779 2 2 24 9 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000031859 Trim24 Rybak2015 chr2 139867829 139883235 - mmu_circ_0001077 15406 350 2 2 9 0 mm_head, mm_brain1, mm_brain2, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001159641 Tasp1 Memczak2013, Rybak2015 chr12 52722766 52762700 - mmu_circ_0000371 39934 1744 5 5 33 19 mm_head, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_052973 Strn3 Memczak2013, Rybak2015 chr16 4154856 4180133 - mmu_circ_0006286 25277 887 6 6 37 23 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, hindbrain, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000023165 Crebbp Rybak2015 chr2 166785522 166790217 - mmu_circ_0009600 4695 404 2 2 6 3 P19_exp1_D0, forebrain, hindbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000109235 Stau1 Rybak2015 chr10 116374452 116376537 - mmu_circ_0001982 2085 540 4 3 22 5 P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, midbrain, hindbrain, cerebellum NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000020375 Rab3ip Rybak2015 chr9 65642428 65643302 - mmu_circ_0001797 874 874 18 15 16 8 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_172536 Zfp609 Memczak2013, Rybak2015 chr6 134708636 134711452 - mmu_circ_0013121 2816 728 6 5 24 7 PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, hippocampus, cerebellum, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000100857 Dusp16 Rybak2015 chr4 94249354 94250183 - mmu_circ_0011861 829 116 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000107107 Plaa Rybak2015 chr18 80334222 80339508 - mmu_circ_0007548 5286 211 2 2 12 7 P19_exp2_D4, P19_exp1_D12, P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000066743 Adnp2 Rybak2015 chr11 49488631 49516156 - mmu_circ_0003069 27525 1739 3 2 0 2 P19_exp2_D4, P19_exp1_D0, PN_D07, P19_exp2_D0 NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR3, UTR5 ENSMUST00000145353 Cnot6 Rybak2015 chrX 47920716 47945262 - mmu_circ_0016295 24546 24546 2 2 0 6 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, INTERNAL, intronic, ncRNA ENSMUST00000124842 6720401G13Rik Rybak2015 chr5 44149460 44164898 - mmu_circ_0001345 15438 1763 2 2 25 19 mm_head, mm_brain2, sy_cell, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001159963 Fbxl5 Memczak2013, Rybak2015 chr9 108413469 108413949 + mmu_circ_0015256 480 245 2 2 57 38 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000134939 Qars Rybak2015 chr5 65957227 65985787 + mmu_circ_0001350 28560 465 8 6 63 55 mm_ES, mm_head, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_016786 Ube2k Memczak2013, Rybak2015 chr9 16179392 16182698 - mmu_circ_0001746 3306 3306 5 5 0 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ALT_ACCEPTOR, CDS, coding, upstream_start, UTR5 NM_001080814 Fat3 Memczak2013, Rybak2015 chr2 24703463 24719428 - mmu_circ_0009734 15965 809 2 2 26 18 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000091348 Ehmt1 Rybak2015 chr5 3747020 3772787 - mmu_circ_0001311 25767 873 3 3 9 7 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001003909 Ankib1 Memczak2013, Rybak2015 chr14 47529785 47536726 + mmu_circ_0005248 6941 6941 4 4 0 0 P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000137543 Samd4 Rybak2015 chr16 94605518 94614781 + mmu_circ_0000713 9263 9263 5 5 11 6 mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None INTERGENIC None None Memczak2013, Rybak2015 chr13 28802985 28822372 - mmu_circ_0004556 19387 19387 4 4 10 13 P19_exp1_D0, forebrain NA ALT_ACCEPTOR, INTERNAL, intronic, ncRNA, OVEXON ENSMUST00000125358 2610307P16Rik Rybak2015 chr2 69707979 69708531 + mmu_circ_0010130 552 188 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000166411 Ssb Rybak2015 chr12 52756388 52762700 - mmu_circ_0000373 6312 260 3 3 31 19 mm_ES, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_052973 Strn3 Memczak2013, Rybak2015 chr2 70608060 70625052 - mmu_circ_0001032 16992 191 9 9 26 27 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_172664 Tlk1 Memczak2013, Rybak2015 chr9 51951779 51952531 - mmu_circ_0015660 752 752 2 2 2 2 P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, cerebellum, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000165519 Zc3h12c Rybak2015 chr1 38164412 38165312 - mmu_circ_0000029 900 191 3 3 8 7 mm_ES, mm_head, PN_D21, sy_cell, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_019570 Rev1 Memczak2013, Rybak2015 chr8 93456147 93457761 + mmu_circ_0001714 1614 1614 5 4 16 6 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, UTR5 NM_177224 Chd9 Memczak2013, Rybak2015 chr5 107063849 107067654 - mmu_circ_0001382 3805 3539 11 10 16 12 mm_ES, mm_head, mm_brain1, P19_exp2_D12, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, hindbrain, cerebellum, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_026856 Zfp644 Memczak2013, Rybak2015 chr15 32199437 32201159 + mmu_circ_0005589 1722 1722 3 3 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D0, forebrain, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000067458 Sema5a Rybak2015 chr9 86316447 86342460 - mmu_circ_0015962 26013 673 2 2 12 10 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000034986 Ube2cbp Rybak2015 chr19 60838060 60838192 + mmu_circ_0007993 132 132 2 2 0 0 P19_exp1_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000025955 Eif3a Rybak2015 chr19 4784723 4794009 - mmu_circ_0000919 9286 2287 4 4 0 7 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, sy_cyto None ALT_ACCEPTOR, ALT_DONOR, CDS, coding, OVCODE, OVEXON, upstream_start, UTR3, UTR5 NM_009032 Rbm4 Memczak2013, Rybak2015 chr11 83318377 83318530 + mmu_circ_0003459 153 153 2 2 0 0 P19_exp2_D12, P19_exp2_D4, P19_exp1_D4, P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000021018 Taf15 Rybak2015 chr19 55455431 55466358 + mmu_circ_0007904 10927 184 2 2 0 12 sy_cell, P19_exp1_D0, midbrain, PN_D07, sy_snpt, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000070075 Vti1a Rybak2015 chr11 53079433 53079551 - mmu_circ_0003118 118 118 5 4 0 78 P19_exp2_D12, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, hippocampus, cerebellum, P19_exp2_D0, sy_cyto NA ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000020630 Hspa4 Rybak2015 chr9 79935236 79951571 + mmu_circ_0001819 16335 474 7 5 22 22 mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_146003 Senp6 Memczak2013, Rybak2015 chr15 82655660 82687714 - mmu_circ_0000628 32054 5866 3 3 0 3 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_013836 Tcf20 Memczak2013, Rybak2015 chr14 61325550 61328406 + mmu_circ_0000547 2856 511 2 2 11 6 mm_ES, mm_head, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, forebrain, hindbrain None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_001033272 Spata13 Memczak2013, Rybak2015 chr8 24301187 24302164 - mmu_circ_0014735 977 977 3 3 31 18 P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000167004 Agpat6 Rybak2015 chr13 58293082 58300431 - mmu_circ_0004696 7349 934 3 3 28 25 PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000058735 Ubqln1 Rybak2015 chr8 113475279 113504993 - mmu_circ_0014567 29714 25700 34 22 0 23 P19_exp2_D12, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_DONOR, CDS, coding, downstream_end, OVCODE, OVERLAPTX, OVEXON, UTR3 ENSMUST00000040416 Ddx19a Rybak2015 chr3 101229373 101231363 + mmu_circ_0010300 1990 789 2 2 11 11 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000043983 Igsf3 Rybak2015 chr15 93271931 93295676 + mmu_circ_0005986 23745 610 2 2 47 21 P19_exp1_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000049122 Pphln1 Rybak2015 chr2 48725808 48728993 + mmu_circ_0001017 3185 473 2 2 9 9 mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON NM_007396 Acvr2a Memczak2013, Rybak2015 chr7 52680086 52680402 + mmu_circ_0014211 316 316 2 2 0 0 P19_exp1_D2, P19_exp1_D0, PN_D01 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000033087 Ruvbl2 Rybak2015 chr1 53921884 53971476 - mmu_circ_0008786 49592 1095 2 2 13 9 PN_D21, sy_cell, PN_D28, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000087659 Hecw2 Rybak2015 chr4 82481349 82500019 - mmu_circ_0001222 18670 694 2 2 12 5 mm_ES, mm_head, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_026647 Zdhhc21 Memczak2013, Rybak2015 chr5 102468868 102470762 - mmu_circ_0011931 1894 1894 3 3 4 0 PN_D28, P19_exp2_D4, P19_exp1_D2, P19_exp1_D0, forebrain, midbrain, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ALT_DONOR, coding, INTERNAL, intronic, OVEXON, UTR5 ENSMUST00000053177 Wdfy3 Rybak2015 chr3 84707422 84708001 + mmu_circ_0010820 579 579 6 6 14 11 P19_exp2_D12, PN_D21, PN_D28, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVERLAPTX, OVEXON, UTR5 ENSMUST00000107679 Fbxw7 Rybak2015 chr10 69605326 69617584 + mmu_circ_0002383 12258 279 7 6 38 27 PN_D21, PN_D28, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D0, hippocampus, PN_D14, sy_cyto NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000147545 Ccdc6 Rybak2015 chr1 180608956 180609490 + mmu_circ_0000120 534 534 2 2 12 0 mm_head, mm_brain1, P19_exp2_D12, PN_D21, P19_exp2_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain, cerebellum, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_001161665 Kif26b Memczak2013, Rybak2015 chrX 140781224 140783962 + mmu_circ_0016141 2738 294 5 4 25 30 P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, PN_D07, sy_snpt, cerebellum, PN_D14, PN_D01, P19_exp2_D0 NA ANNOTATED, coding, INTERNAL, OVEXON, UTR3 ENSMUST00000154827 Alg13 Rybak2015 chr10 59475209 59512619 + mmu_circ_0002312 37410 534 8 8 31 8 P19_exp2_D4, P19_exp1_D4, P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000164083 Ascc1 Rybak2015 chr12 106886522 106889733 - mmu_circ_0003692 3211 625 2 2 10 5 P19_exp1_D0, forebrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000041055 Atg2b Rybak2015 chr17 46380240 46380344 + mmu_circ_0006785 104 104 2 2 0 0 P19_exp1_D0 NA INTERGENIC None None Rybak2015 chr5 3755593 3772787 - mmu_circ_0012619 17194 755 2 2 16 7 PN_D21, olfactory_bulb, P19_exp1_D0, forebrain, hindbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 ENSMUST00000043551 Ankib1 Rybak2015 chr2 69337279 69338739 + mmu_circ_0010127 1460 1460 2 2 0 0 P19_exp1_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000080953 Lrp2 Rybak2015 chr6 106727937 106728042 - mmu_circ_0012914 105 105 3 3 0 0 P19_exp2_D12, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D0, cerebellum, P19_exp2_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000057578 Trnt1 Rybak2015 chr2 5844914 5853588 - mmu_circ_0010034 8674 833 2 2 14 8 P19_exp1_D0, forebrain, midbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000095147 Dhtkd1 Rybak2015 chr17 45707671 45708053 - mmu_circ_0006777 382 164 3 2 0 0 PN_D28, P19_exp2_D4, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ALT_DONOR, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000024739 Hsp90ab1 Rybak2015 chr4 149780304 149780773 + mmu_circ_0001295 469 469 2 2 11 0 mm_head, mm_brain1, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001085492 Rere Memczak2013, Rybak2015 chr13 44969651 44980249 + mmu_circ_0004606 10598 347 2 2 37 50 olfactory_bulb, P19_exp1_D0 NA ANNOTATED, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000174683 Jarid2 Rybak2015 chr14 22335847 22336720 + mmu_circ_0000505 873 873 2 2 2 0 mm_ES, mm_head, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_017479 Myst4 Memczak2013, Rybak2015 chr18 55106206 55106462 - mmu_circ_0000874 256 256 2 2 17 12 mm_head, P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, forebrain, midbrain, hindbrain, PN_D14, PN_D01 None ANNOTATED, CDS, coding, INTERNAL NM_175751 Zfp608 Memczak2013, Rybak2015 chr13 51225140 51225249 + mmu_circ_0004639 109 109 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, coding, INTERNAL, intronic ENSMUST00000057478 Spin1 Rybak2015 chr18 6111682 6115848 - mmu_circ_0000840 4166 792 4 4 19 4 mm_ES, mm_head, mm_brain1, mm_brain2, PN_D21, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_029277 Arhgap12 Memczak2013, Rybak2015 chr19 46360248 46360363 - mmu_circ_0007852 115 115 2 2 0 0 P19_exp1_D0 NA ANTISENSE, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000026254 Gbf1 Rybak2015 chr13 64344941 64348626 - mmu_circ_0000472 3685 260 2 2 27 29 mm_brain1, mm_brain2, sy_cell, olfactory_bulb, P19_exp2_D4, P19_exp1_D12, P19_exp1_D0, forebrain, cerebellum None ANNOTATED, CDS, coding, INTERNAL NM_172587 Cdc14b Memczak2013, Rybak2015 chr13 28975183 28986213 - mmu_circ_0004559 11030 9464 4 3 0 12 P19_exp2_D4, P19_exp1_D2, P19_exp1_D12, P19_exp1_D0, P19_exp2_D0 NA ALT_ACCEPTOR, ncRNA, OVEXON, upstream_start ENSMUST00000148885 2610307P16Rik Rybak2015 chr15 39398488 39448056 + mmu_circ_0000595 49568 516 2 2 3 8 mm_head, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_053271 Rims2 Memczak2013, Rybak2015 chr7 126187372 126188366 + mmu_circ_0013822 994 994 2 2 0 0 P19_exp1_D0 NA INTERGENIC None None Rybak2015 chr6 98953193 98960051 - mmu_circ_0013638 6858 359 2 2 20 16 PN_D21, P19_exp2_D4, frontal_cortex, P19_exp1_D2, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, hindbrain, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000113328 Foxp1 Rybak2015 chr5 143731583 143732364 + mmu_circ_0012277 781 447 2 2 71 82 P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hindbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000031565 Fscn1 Rybak2015 chr4 131909225 131909377 - mmu_circ_0011280 152 152 2 2 0 0 P19_exp1_D0 NA ALT_ACCEPTOR, ALT_DONOR, ncRNA, OVERLAPTX, OVEXON, upstream_start ENSMUST00000136127 Snhg3 Rybak2015 chr17 84822371 84846065 - mmu_circ_0007064 23694 2421 8 6 83 7 P19_exp1_D0, P19_exp2_D0 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000047524 Thada Rybak2015 chr4 151204526 151209992 - mmu_circ_0001306 5466 189 2 2 3 2 mm_ES, mm_brain1, mm_brain2, P19_exp2_D12, PN_D21, sy_cell, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL NM_001195565 Camta1 Memczak2013, Rybak2015 chr6 115825261 115827569 + mmu_circ_0012968 2308 156 2 2 14 22 P19_exp2_D4, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0 NA ANNOTATED, INTERNAL, ncRNA, OVCODE, OVEXON ENSMUST00000141305 Ift122 Rybak2015 chr5 130663270 130666913 + mmu_circ_0001414 3643 353 2 2 18 2 mm_brain1, PN_D21, sy_cell, PN_D28, olfactory_bulb, frontal_cortex, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, cerebellum, PN_D14, PN_D01, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_001199059 Rabgef1 Memczak2013, Rybak2015 chr5 111184415 111185785 - mmu_circ_0001388 1370 1370 5 4 8 13 mm_ES, mm_head, mm_brain1, P19_exp2_D12, PN_D21, PN_D28, olfactory_bulb, P19_exp2_D4, frontal_cortex, P19_exp1_D12, P19_exp1_D4, P19_exp1_D0, forebrain, midbrain, PN_D07, hippocampus, sy_snpt, hindbrain, cerebellum, PN_D14, PN_D01, P19_exp2_D0, sy_cyto None ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON, UTR5 NM_029337 Ep400 Memczak2013, Rybak2015 chr11 119605180 119617728 + mmu_circ_0002819 12548 323 2 2 18 20 P19_exp1_D0, hindbrain, cerebellum, PN_D14 NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000026671 Rptor Rybak2015 chr17 75465250 75465542 + mmu_circ_0007011 292 292 3 2 7 9 P19_exp2_D4, P19_exp1_D0, hindbrain NA ANNOTATED, CDS, coding, INTERNAL, OVCODE, OVEXON ENSMUST00000001927 Ltbp1 Rybak2015